Documentation

FractionMono

FractionMono[sequence,monos]⟹fraction

determines the fraction of a given sequence composed of members of the provided list of Monomers.

Details

Input

Output

General Options

Examples

Basic Examples (2)

Calculate the fraction of a given sequence that is composed of A's or T's:

Calculate the fraction of a given RNA sequence that is composed of A's or U's:

Additional Examples (5)

The sequence may be explicitly typed:

Explicitly type the Monomers:

All arguments may be explicitly typed:

Count monomer fraction for a LNAChimera oligomer:

Count monomer fraction for a LNAChimera oligomer with a degenerate alphabet:

Options (2)

Degeneracy (1)

By default, degenerate Monomers will count for a 1/4 of each monomer:

Polymer (1)

Designate the polymer type that defines the monomer alphabet:

Attributes (2)

Listable (2)

Calculate the fraction of A's and U's in each sequence of a list:

MapThreads through arguments if multiple sets of Monomers are given: